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broadinstitute / chronos

Modeling of time series data for CRISPR KO experiments
BSD 3-Clause "New" or "Revised" License
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Image size error #3

Closed anna-alemany closed 1 month ago

anna-alemany commented 11 months ago

Dear chronos coders,

We are trying to run your pipeline in our CRISPR screen. The dimensions of our readcounts matrix are 46x37722. When running the reports.qc_initial_data line, we get a ValueError saying that the Image size of 1500x283800 pixels is too large. It must be less than 2^16 in each direction. We have unsuccessfully been looking at the source code to try to understand where this comes from. Could you help us out?

Thanks!

joshdempster commented 6 months ago

Hi Anna, can you provide the full traceback?