Open bioprojects opened 1 year ago
The HTTP library we use [0] does not support proxies [1], therefore it is not possible for Cromwell to support them either without a whole-library replacement.
The certificate error is normal and a red herring, it occurs because certs apply to domain names and not IP addresses. I can reproduce it locally with no proxy.
[0] https://github.com/broadinstitute/cromwell/blob/17efd599d541a096dc5704991daeaefdd794fefd/project/Dependencies.scala#L166 [1] https://github.com/http4s/blaze/issues/656
Hello, I executed the following workflow using chromwell behind a proxy
$ java \ -Djava.net.useSystemProxies=true \ -Dhttp.proxyHost=202.241.78.237 -Dhttp.proxyPort=8080 \ -Dhttps.proxyHost=202.241.78.237 -Dhttps.proxyPort=8080 \ -jar cromwell-85.jar run public_health_bacterial_genomics/workflows/wf_theiaprok_illumina_pe.wdl -i input.json
but it caused the following error, indicating connection with quay.io/50.17.122.58:443 timed out.
To confirm https (port 443) access to the quay.io/50.17.122.58 in this environment, I executed wget $ wget https://50.17.122.58/ but it caused
I guess an option similar to `--no-check-certificate' in wget need to be implemented in cromwell to fix this problem. Could you please do it?
Many thanks in advance.
Koji Yahara Group Leader Antimicrobial Resistance Research Center National Institute of Infectious Diseases Japan