refactor vcf_to_depmap that is compatible with latest MAF format

broadinstitute / depmap_omics

What you need to process the Quarterly DepMap-Omics releases from Terra

https://depmap.org/portal/

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Closed qinqian closed 1 year ago

5im1z commented 1 year ago

Should this step happen in vcf_to_maf or postprocessing?

qinqian commented 1 year ago

This step should merge both vcf_to_maf and postprocessing together