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broadinstitute / depmap_omics

What you need to process the Quarterly DepMap-Omics releases from Terra
https://depmap.org/portal/
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Guidemat wdl #240

Open 5im1z opened 6 days ago

5im1z commented 6 days ago

added new libraries to the workflow that generates tables indicating whether there are mutations present in the guide regions. discovered an ancient bug along the way so I also restructured it a bit to use bedtools instead of a convoluted python function