- fixing bugs in the "regular" mode of group_umis; also off by one bug fix for gene in "fast" mode

broadinstitute / epi-SHARE-seq-pipeline

Epigenomics Program pipeline to analyze SHARE-seq data.

MIT License

17 stars 3 forks source link

- fixing bugs in the "regular" mode of group_umis; also off by one bug fix for gene in "fast" mode #51

Closed nchernia closed 2 years ago

nchernia commented 2 years ago

Group UMIs in regular mode needed several changes (localizing bam, a whitespace error, an extra line in the observed barcodes, output duplicates) in order to work properly.

Off by one gene error in fast mode, now gene is stored alongside barcode key/umi.