crom - /opt/execution, /opt/inputs may be symlinked to old run

broadinstitute / firecloud_developer_toolkit

Utilities to help algorithm developers dockerize new tasks, debug them, and put them into Firecloud.

BSD 3-Clause "New" or "Revised" License

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crom - /opt/execution, /opt/inputs may be symlinked to old run #29

Open gsaksena opened 7 years ago

gsaksena commented 7 years ago

If cromwell takes a while starting up, the symlinks may be dropped before the new output directory exists. This affects debug during/after runcromwell, as well as what runbash links to.