Mutect2: only output calls that *start* in the current shard

broadinstitute / gatk-protected

Obsolete/Legacy GATK repository -- go to https://github.com/broadinstitute/gatk instead

BSD 3-Clause "New" or "Revised" License

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Closed droazen closed 7 years ago

droazen commented 7 years ago

Previously the tool was outputting calls that were completely contained within the current shard.

Resolves #1081

droazen commented 7 years ago

@davidbenjamin please review