TargetCoverageSexGenotyper and PAR regions

broadinstitute / gatk-protected

Obsolete/Legacy GATK repository -- go to https://github.com/broadinstitute/gatk instead

BSD 3-Clause "New" or "Revised" License

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Closed mbabadi closed 7 years ago

mbabadi commented 7 years ago

[ ] Add the ability to blacklist PAR regions with an argument, e.g. --blacklistRegion contig1:start1-end1 --blacklistRegion contig2:start2-end2 --blacklistRegion contig3:start3-end3 ...

droazen commented 7 years ago