Closed sooheelee closed 7 years ago
Nope, botched commit in attempt to rename my local branch.
Hey @LeeTL1220, is there a way to only keep the changes to PerformAlleleFractionSegmentation.java? I have other branches for the changes in the other two files.
I will redo this.
No example command since there is no WDL for me to reference. FYI @LeeTL1220 @achevali.
There is no WDL because this tool is experimental. In general, you should be able to put together example command lines from the integration tests for a tool.
tag doc and mention that the tumorHets file is from GetHetCoverage.
We should probably say that the tumorHets file is from GetBayesianHetCoverage, preferably, but can also come from GetHetCoverage.
Oops, just saw that you closed this, @sooheelee! Just so you know, you could've removed the unwanted files using git.