Xz fixes 5 - Githubissues

broadinstitute / gatk-sv

A structural variation pipeline for short-read sequencing

BSD 3-Clause "New" or "Revised" License

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Closed xuefzhao closed 3 weeks ago

xuefzhao commented 3 months ago

updated the AF annotation scripts to :

epiercehoffman commented 3 weeks ago

Updated CN_STATUS description for clarity
Added 1KG population assignments file for testing population AF annotation
Tested AnnotateVcf on reference panel and verified that CN_STATUS description and AF_pop fields were as expected in output