search

broadinstitute / gatk-sv

A structural variation pipeline for short-read sequencing
BSD 3-Clause "New" or "Revised" License
170 stars 70 forks source link

Filter allosomal genotypes for samples with unassigned sex #658

Open mwalker174 opened 6 months ago

mwalker174 commented 6 months ago

This is supposed to be done in CleanVcf1a but it does not appear to be working, perhaps as a result of a downstream step.