6F adjustment metadata matrices

broadinstitute / gatk-sv

A structural variation pipeline for short-read sequencing

BSD 3-Clause "New" or "Revised" License

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Open Dagsbio opened 3 months ago

Dagsbio commented 3 months ago

Hi, reading the WGD readme I read that the 6F adjustment metadata matrices are available upon request.

Could someone please provide me with that file for hg19?

I would like to annotate my WGS with dosage bias score

Thank you!

mwalker174 commented 3 months ago

@RCollins13 can provide that

RCollins13 commented 3 months ago

Hi, the README must be outdated. We don't recommend or support the 6F correction and haven't since 2018. Apologies for the confusion!

Dagsbio commented 3 months ago

Hi. Thanks both for your replies.

Would be possible then to get appropiate instructions to WGD score my samples?

Best regards,

David.