Add genotype filtering Terra workflow configs and documentation

broadinstitute / gatk-sv

A structural variation pipeline for short-read sequencing

BSD 3-Clause "New" or "Revised" License

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Open mwalker174 opened 3 months ago

mwalker174 commented 3 months ago

Adds JoinRawCalls, SVConcordance, and FilterGenotypes Terra workflow configurations. Note that the workflow numbering in Dockstore and Terra are not yet updated.
Updates genotype filtering documentation

Tested on our "bwa-melt" benchmarking workspace, which had a recent cleaned vcf to work from.