[ah_var_store] Retry with more memory VCF extract [VS-1351]

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Official code repository for GATK versions 4 and up

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[ah_var_store] Retry with more memory VCF extract [VS-1351] #8812

Closed mcovarr closed 1 month ago

mcovarr commented 1 month ago

~Currently in draft status, I still need to test this the way I tested the PGEN version.~ Tested, works, ready for review!

mcovarr commented 1 month ago

Tested and working, taking out of Draft status.

mcovarr commented 1 month ago

LGTM. Also wondering if we want to add in documentation on the quota increases that we need for extract so that those can be requested well before extract is kicked off?

I will be more than happy to document how to have quotas increased as soon as I figure out how to actually accomplish that, which so far I have not. 😞