broadinstitute / gatk

Official code repository for GATK versions 4 and up
https://software.broadinstitute.org/gatk
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VS-1490 - Refactor python code from extract dir into a scripts directory. #9017

Closed gbggrant closed 1 week ago

gbggrant commented 1 month ago

Refactor python code from extract dir into a scripts directory.

Passing Integration Test here Passing VAT Creation work here, here, and here