broadinstitute / gatk

Official code repository for GATK versions 4 and up
https://software.broadinstitute.org/gatk
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RW-14014 Fix vpcError in wdl #9053

Open Qi77Qi opened 6 hours ago

Qi77Qi commented 6 hours ago

With gcloud storage -I, we're getting the following error.

..Copying gs://fc-56d2f6f5-3efa-46f7-8c01-0911fd77f888/submissions/73f18f4f-f88b-4f46-83d7-2998ce5a0d25/GvsExtractCohortFromSampleNames/097c9f79-900d-4e45-adaa-bb8f100dc53d/call-GvsExtractCallset/GvsExtractCallset/d249a1a4-204a-4972-bd0a-3bb12999bc86/call-ExtractTask/shard-1/0000000001-interval.vcf.gz to gs://fc-secure-f6332460-81bb-4ded-94e5-214743db1aa8/genomic-extractions/e9da8875-864a-4f96-b6fe-88e20bec8b44/vcfs/0000000001-interval.vcf.gz
ERROR: HTTPError 403: Request is prohibited by organization's policy. vpcServiceControlsUniqueIdentifier: GRWoMNGFnANXFJWmSXVv31rx0oUERx2Y_pgSlvX65JScnio75NqJgR29GsaU97wDGKBpC2o_cL_EY89S
ERROR: HTTPError 403: Request is prohibited by organization's policy. vpcServiceControlsUniqueIdentifier: d4CSCzEPJIJWrNUzRcTMOg_fDcjamQSXjYr94q76VTQb5k9-E73jUyysqJAL-13rVZ9H1EwRS7YzPdo4

Changing it back to non pipe syntax fixes the issue (the error is very deceiving)