broadinstitute / gdctools

Python and UNIX CLI utilities to simplify interaction with the NIH/NCI Genomics Data Commons
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fragility: gdc_report looks for config/blacklist.tsv (per tcga.cfg) ... #49

Open noblem opened 7 years ago

noblem commented 7 years ago

... but that file is not installed by default during make install. My hunch is that it may've been copied into /xchip/gdac_data/gdc/config by hand ... and when I cleaned out that directory recently the result was a broken gdc_report generator. So I stubbed in the placeholder blacklist.tsv (and also left a README therein, describing what's needed to correct)