broadinstitute / gdctools

Python and UNIX CLI utilities to simplify interaction with the NIH/NCI Genomics Data Commons
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RFE: facilitate operation of downstream tools in offline mode #62

Open noblem opened 6 years ago

noblem commented 6 years ago

Today the GDC was responding sluggishly and timing out on REST calls. In such cases, it would be nice if any tool AFTER gdc_mirror would be able to operate PURELY by reading the mirror, and then dicing, etc. In principle this is how all tools downstream of gdc_mirror OUGHT to operate, but in practice each one currently issues a few GDC calls to gather metadata (like the number and names of programs, projects, etc).