Unlike with mirroring, dicing and loadfile generation, presently the internal Broad operation does not write sample reports to a directory whose path is unique to the "GDC program" for which the sample report has been generated. This was not a a concern when only TCGA were being processed, but will be confusing when data for new programs (like CPTAC) will be integrated into the gdac_data tree.
noblem
commented
5 years ago
Unlike with mirroring, dicing and loadfile generation, presently the internal Broad operation does not write sample reports to a directory whose path is unique to the "GDC program" for which the sample report has been generated. This was not a a concern when only TCGA were being processed, but will be confusing when data for new programs (like CPTAC) will be integrated into the gdac_data tree.