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broadinstitute / gnomad-browser

Explore gnomAD datasets on the web
https://gnomad.broadinstitute.org
MIT License
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Show protein domains on variant page #809

Closed nawatts closed 3 years ago

nawatts commented 3 years ago

Add protein domains (from VEP annotations) to variant page.

nawatts commented 3 years ago

The domains field stored in ES is a concatenation of the db and name from the VEP field.

https://github.com/broadinstitute/gnomad-browser/blob/9f6a00bfabbd9446ad804ab80ce02bebcc635aef/data-pipeline/src/data_pipeline/data_types/variant/transcript_consequence/annotate_transcript_consequences.py#L31

The set of all dbs in gnomAD v2 and v3 is: