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broadinstitute / gnomad_local_ancestry

Hail batch pipeline and scripts for local ancestry inference
MIT License
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Run accuracy script on simulated data and assess #94

Closed mike-w-wilson closed 3 years ago

mike-w-wilson commented 3 years ago

Ran accuracy script on simulated data. Results and discussion posted to slack: https://atgu.slack.com/archives/C013XHM3B8S/p1630090755012000

Percent_correct_by_prop.pngPercent_correct_by_ancestry.png

We will be moving forward with the current reference panel for the first version of the lai run.