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broadinstitute / infercnv

Inferring CNV from Single-Cell RNA-Seq
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ValueError: need at least one array to concatenate #457

Open dhy2002 opened 2 years ago

dhy2002 commented 2 years ago

when I run cnv.tl.infercnv(adata) with my own data It raises ValueError: need at least one array to concatenate can anyone help to solve it?

GeorgescuC commented 2 years ago

Hi @dhy2002 ,

It seems like you are using the Python reimplementation of infercnv done by another group and in which we are not involved so I unfortunately cannot help. You should try asking directly (on their github page)[https://github.com/icbi-lab/infercnvpy].

Regards, Christophe.