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broadinstitute / infercnv

Inferring CNV from Single-Cell RNA-Seq
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Error in plot.new() : figure margins too large #563

Open 1JYL123 opened 1 year ago

1JYL123 commented 1 year ago

hi, when I run infercnv in Linux, I get this error in step15. Error in plot.new() : figure margins too large Calls: ... image -> image.default -> plot -> plot.default -> plot.new.

my code is as follows. infercnv_obj <- infercnv::run(infercnv_obj, cutoff = 0.1, out_dir = "infercnv", denoise = T, HMM = F, output_format = "pdf", cluster_by_groups=TRUE, num_threads = 20)

The version of infercnv is 1.17.0.

I try my best to solve this error, but I don't find effective solution.

1JYL123 commented 8 months ago

I used version 1.12.0 of infercnv

------------------ 原始邮件 ------------------ 发件人: "broadinstitute/infercnv" @.>; 发送时间: 2024年2月28日(星期三) 下午3:41 @.>; @.**@.>; 主题: Re: [broadinstitute/infercnv] Error in plot.new() : figure margins too large (Issue #563)

I ran into the same error, any suggestion? thanks

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