Extracting HMM Features for chromosomal arm level

broadinstitute / infercnv

Inferring CNV from Single-Cell RNA-Seq

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Extracting HMM Features for chromosomal arm level #653

Open seongguheo opened 7 months ago

seongguheo commented 7 months ago

Hi,

Thank you for infercnv, which is truly wonderful tool for cnv study via scRNA-seq. I wonder if there is a way to call CNV for a targeted genomic region only, e.g., chr1, chr1q, and even smaller segments like chr1q22.1.

Thank you, Luke