Closed gwaybio closed 4 years ago
- [ ] 5. Output a separate file for a feature selected consensus signature (derived after calculating consensus)
You would not be able to do replicate_correlation
selection on consensus profiles. You'd need to do this on the Level 4b data across all plates instead. But also note that when we do so, we first sample a subset of the plates to avoid inflating the report replicate correlations.
I'd skip 5. for now unless it is blocking
closed in #40
My current plan is as follows:
median
andMODZ
Unifying documentation for this step from https://github.com/broadinstitute/lincs-cell-painting/issues/4#issuecomment-620839509 and https://github.com/broadinstitute/lincs-cell-painting/pull/34#issuecomment-629307961