Adding PCA code and figure to compare PCA coordinates against replicate reproducibility
Legend: Principal components analysis (PCA) of Cell Painting and L1000 describing regions of replicate reproducibility. We show scatters for principal components 1, 2, and 3.(a) PCA coordinates in Cell Painting. (b) PCA coordinates in L1000. We set the threshold using the dose-matched null distribution as previously described.
This figure likely belongs after original Supplementary Figure 7.
Adding PCA code and figure to compare PCA coordinates against replicate reproducibility
Legend: Principal components analysis (PCA) of Cell Painting and L1000 describing regions of replicate reproducibility. We show scatters for principal components 1, 2, and 3.(a) PCA coordinates in Cell Painting. (b) PCA coordinates in L1000. We set the threshold using the dose-matched null distribution as previously described.
This figure likely belongs after original Supplementary Figure 7.