broadinstitute / oncotator

Other
67 stars 32 forks source link

pysam 0.9.0 requirement #366

Open crutching opened 7 years ago

crutching commented 7 years ago

samtools/bam_tview_curses.c.pysam.c:28:20: error: config.h: No such file or directory samtools/bam_tview_curses.c.pysam.c:343:2: warning: #warning "No curses library is available; tview with curses is disabled." error: Setup script exited with error: command 'gcc' failed with exit status 1

It wasn't immediately clear to me how to deal with this error, though I imagine just removing that config.h file from pysam would've worked. After beating my head against the wall for a while, I simply modified setup.py and made the pysam version 0.9.1.