no bam file - Githubissues

broadinstitute / pilon

Pilon is an automated genome assembly improvement and variant detection tool

GNU General Public License v2.0

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no bam file #153

Open rmormando opened 1 year ago

rmormando commented 1 year ago

I just assembled some yeast genomes with flye and would like to polish those assemblies with this tool but I don't have a sorted BAM file from that assembly.

how do I make one?

mlarjim commented 1 year ago

Hi! this is a non official tutorial, hope it is helpful https://timkahlke.github.io/LongRead_tutorials/ECR_P.html