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broadinstitute / poasta

Fast and exact gap-affine partial order alignment
BSD 3-Clause "New" or "Revised" License
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Create unit tests for adding sequences/alignments to a graph #3

Open lrvdijk opened 1 year ago

lrvdijk commented 1 year ago

The easiest way to check whether the output is correct is probably to compare the alignments to output from SPOA, because it's an existing, exact partial order aligner.

The easiest way to compare SPOA's output the our output is probably by comparing the row-column FASTA MSA representations, so this issue is dependent on #14.