Here, we add the normalization step to the pooled cell painting recipe. We use pycytominer.normalize() to perform the normalization, and we include all options in an updated config file.
I describe a very important TODO/caveat/improvement in #15 - The script works and will keep us marching forward, but we should stop and think about this single-cell problem soon.
Here, we add the normalization step to the pooled cell painting recipe. We use
pycytominer.normalize()to perform the normalization, and we include all options in an updated config file.I describe a very important TODO/caveat/improvement in #15 - The script works and will keep us marching forward, but we should stop and think about this single-cell problem soon.