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broadinstitute / position-effect-correction

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Per-batch plate effects visualizations #7

Open alxndrkalinin opened 1 year ago

alxndrkalinin commented 1 year ago

I gathered plate effect visualizations from jump-orf-data QC into per-batch composite images that can be viewed below.

Missing panels in percent replicating plots designate control plates, for which this metric was not calculated.

Cell_count

Percent replicating ![Percent_replicating](https://github.com/broadinstitute/position-effect-correction/blob/main/1.load/output/visualize_plate_effects/2021_04_26_Batch1_position_effect_summary.png?raw=true)

Cell_count

Percent replicating ![Percent_replicating](https://github.com/broadinstitute/position-effect-correction/blob/main/1.load/output/visualize_plate_effects/2021_05_10_Batch3_position_effect_summary.png?raw=true)

Cell_count

Percent replicating ![Percent_replicating](https://github.com/broadinstitute/position-effect-correction/blob/main/1.load/output/visualize_plate_effects/2021_05_17_Batch4_position_effect_summary.png?raw=true)

Cell_count

Percent replicating ![Percent_replicating](https://github.com/broadinstitute/position-effect-correction/blob/main/1.load/output/visualize_plate_effects/2021_05_31_Batch2_position_effect_summary.png?raw=true)

Cell_count

Percent replicating ![Percent_replicating](https://github.com/broadinstitute/position-effect-correction/blob/main/1.load/output/visualize_plate_effects/2021_06_07_Batch5_position_effect_summary.png?raw=true)

Cell_count

Percent replicating ![Percent_replicating](https://github.com/broadinstitute/position-effect-correction/blob/main/1.load/output/visualize_plate_effects/2021_06_14_Batch6_position_effect_summary.png?raw=true)

Cell_count

Percent replicating ![Percent_replicating](https://github.com/broadinstitute/position-effect-correction/blob/main/1.load/output/visualize_plate_effects/2021_06_21_Batch7_position_effect_summary.png?raw=true)

Cell_count

Percent replicating ![Percent_replicating](https://github.com/broadinstitute/position-effect-correction/blob/main/1.load/output/visualize_plate_effects/2021_07_12_Batch8_position_effect_summary.png?raw=true)

Cell_count

Percent replicating ![Percent_replicating](https://github.com/broadinstitute/position-effect-correction/blob/main/1.load/output/visualize_plate_effects/2021_07_26_Batch9_position_effect_summary.png?raw=true)

Cell_count

Percent replicating ![Percent_replicating](https://github.com/broadinstitute/position-effect-correction/blob/main/1.load/output/visualize_plate_effects/2021_08_02_Batch10_position_effect_summary.png?raw=true)

Cell_count

Percent replicating ![Percent_replicating](https://github.com/broadinstitute/position-effect-correction/blob/main/1.load/output/visualize_plate_effects/2021_08_09_Batch11_position_effect_summary.png?raw=true)

Cell_count

Percent replicating ![Percent_replicating](https://github.com/broadinstitute/position-effect-correction/blob/main/1.load/output/visualize_plate_effects/2021_08_23_Batch12_position_effect_summary.png?raw=true)

Cell_count

Percent replicating ![Percent_replicating](https://github.com/broadinstitute/position-effect-correction/blob/main/1.load/output/visualize_plate_effects/2021_08_30_Batch13_position_effect_summary.png?raw=true)