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broadinstitute / seqr-loading-pipelines

hail-based pipelines for annotating variant callsets and exporting them to elasticsearch
MIT License
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Add consanguinity coefficient into pipeline #312

Open mike-w-wilson opened 2 years ago

mike-w-wilson commented 2 years ago

Add measure of consanguinity to pipeline for seqr upload -- ROH. This likely belongs in the sample QC pipeline but adding this here for tracking purposes.

bpblanken commented 2 months ago

@matren395 we should also check in on this!