broadinstitute / seqr-loading-pipelines

hail-based pipelines for annotating variant callsets and exporting them to elasticsearch
MIT License
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mito dataset changes #698

Closed jklugherz closed 8 months ago

jklugherz commented 8 months ago

we expect 2 datasets will update, clinvar_mito and dbnsfp_mito

clinvar_mito: these fields changed in most recent clinvar update, I checked the clinvar vcfs for 37 and 38 to make sure there's no instances of 'classification' and 'interpretations' in the same file

dbnsfp_mito: I updated the test rdc tables to match expected format with most recent dbnsfp annotations