try moving clinvar submitter tmp file to gcs before importing

broadinstitute / seqr-loading-pipelines

hail-based pipelines for annotating variant callsets and exporting them to elasticsearch

MIT License

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Closed jklugherz closed 5 months ago

jklugherz commented 5 months ago

getting hail.utils.java.FatalError: HailException: arguments refer to no files: Vector(/tmp/tmprjuly50t.txt.gz). in test run