broadinstitute / seqr-loading-pipelines

hail-based pipelines for annotating variant callsets and exporting them to elasticsearch
MIT License
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VEP 110 docker image and dataproc init script #758

Closed bpblanken closed 4 months ago

bpblanken commented 4 months ago

This is in a functional state now! I've confirmed that the hail/vep interface is working and I'd like to get this onto the dev branch.

My plan was to run "vep" without enum mapping on 5% of the reference data to start probing the values & make sure it's working at scale.