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broadinstitute / seqr-loading-pipelines

hail-based pipelines for annotating variant callsets and exporting them to elasticsearch
MIT License
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add sample_type to family and project table paths #842

Closed jklugherz closed 2 months ago

jklugherz commented 3 months ago

This will require a one-time migration to move all existing family tables into their sampletype subfolder. This won't be too bad as sample_type is already in the table globals.

jklugherz commented 2 months ago

TODO: change path from v03 to 3.1, but keep reference data the same