Turns out passing VEP_CONFIG_URI is going to be very annoying if we're trying to support both reference genomes. This fixes by:
Removing the env var.
Moving the configs to seqr-reference-data instead of seqr-luigi so that they're not in the "v03_pipeline" package for local users but will be downloaded with the rest of the VEP data. This pattern becomes shared between our dataproc and on prem users.
Turns out passing
VEP_CONFIG_URIis going to be very annoying if we're trying to support both reference genomes. This fixes by:seqr-reference-datainstead ofseqr-luigiso that they're not in the "v03_pipeline" package for local users but will be downloaded with the rest of the VEP data. This pattern becomes shared between our dataproc and on prem users.