broadinstitute / seqr

web-based analysis tool for rare disease genomics
GNU Affero General Public License v3.0
176 stars 88 forks source link

Restrict variants to high priority genes #3199

Closed lynnpais closed 1 year ago

lynnpais commented 1 year ago

Is your feature request related to a problem? Please describe. We updated the HPO prioritized gene list on the Family Page to show the top ten results. However, the feature to show variants in high-ranked genes returns variants in genes that are not part of the top 10. In the example here, the search is returning ~10,000 variants.

Describe the solution you'd like Restrict variants returned using the Search for variants in high-ranked genes to the prioritized genes in the list on the Family Page.

Describe alternatives you've considered NA

Additional context Family page - https://seqr.broadinstitute.org/project/R0384_rare_genomes_project_gen/family_page/F031995_rgp_2007

Screen Shot 2023-02-02 at 1 06 52 PM

Results page- https://seqr.broadinstitute.org/variant_search/results/2bc1bf376c14ba1046d38abb317a46b5?page=1&sort=pathogenicity

Screen Shot 2023-02-02 at 1 07 36 PM
hanars commented 1 year ago

this is now working