Describe the bug
Variants in the results list go missing when I choose to 'unpair' variants in an unrelated gene. In the example here, I ran a recessive permissive search. The results included compound heterozygous variants in COL6A6. There were also poor quality variants in MUC4, so I selected unpair to remove the pairs. This took away many other variants in other genes including COL6A6, HSPG2 and others.
hanars
commented
1 year ago
Describe the bug Variants in the results list go missing when I choose to 'unpair' variants in an unrelated gene. In the example here, I ran a recessive permissive search. The results included compound heterozygous variants in COL6A6. There were also poor quality variants in MUC4, so I selected unpair to remove the pairs. This took away many other variants in other genes including COL6A6, HSPG2 and others.
Link to page(s) where bug is occurring Recessive permissive search results - https://seqr.broadinstitute.org/variant_search/results/8472467c924bca1f317ccdf92289cf65?page=1&sort=pathogenicity
Results after selecting unpair - https://seqr.broadinstitute.org/variant_search/results/8472467c924bca1f317ccdf92289cf65?page=1&sort=pathogenicity
Scope of the bug Noticed it in RGP_1157 today. Not sure of other cases.
Screenshots