This PR introduces convenience scripts to allow users to generate SCP files required for visualization directly from their analysis objects (Seurat, Anndata, etc).
Functionality includes:
Writing expression matrix files (in Matrix Market format, compression optional)
Writing cluster files
Writing metadata files (including a basic check for required metadata types)
Interactive functions to allow users to easily add required metadata columns for datasets where metadata values are constant across entire dataset (no copy/pasting)
Aims to support at least the most common analysis objects (Seurat and Anndata).
This PR introduces convenience scripts to allow users to generate SCP files required for visualization directly from their analysis objects (Seurat, Anndata, etc).
Functionality includes:
Aims to support at least the most common analysis objects (Seurat and Anndata).