Critical fix to docker build: specify viral-core's requirements-conda.txt alongside viral-classify's for mamba solve so that installing new packages doesn't degrade/break viral-core packages.
Also update versions and loosen version pins for various conda packages.
Bugfix to metagenomics.filter_taxids_to_focal_hits handling of taxids (behavior was wrong for including children of observed nodes).
Fix to unit testing of blast depletion: newer versions of blast have more index files than before.
Critical fix to docker build: specify viral-core's requirements-conda.txt alongside viral-classify's for mamba solve so that installing new packages doesn't degrade/break viral-core packages.
Also update versions and loosen version pins for various conda packages.
Bugfix to
metagenomics.filter_taxids_to_focal_hitshandling of taxids (behavior was wrong for including children of observed nodes).Fix to unit testing of blast depletion: newer versions of blast have more index files than before.