aggregate viral summary from krakenuniq WDL task

broadinstitute / viral-ngs

Viral genomics analysis pipelines

Other

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aggregate viral summary from krakenuniq WDL task #948

Closed tomkinsc closed 5 years ago

tomkinsc commented 5 years ago

This PR changes the krakenuniq WDL task to write out a species-level summary of Viruses classified by KrakenUniq, aggregating information in kraken reports from all input samples.