bump viral-core docker image from 2.1.16 to 2.1.19
add a note column to the genbank source modifier table and populate with either the BioSample's purpose_of_sequencing field if it exists, or the purpose_of_sampling (or blank if none exist).
add a --sgtf_override option to ncbi.biosample_to_genbank that replaces certain PHA4GE-defined values of note ("Screening for Variants of Concern (VoC)") with SPHERES-defined values ("screened by S dropout").
notecolumn to the genbank source modifier table and populate with either the BioSample'spurpose_of_sequencingfield if it exists, or thepurpose_of_sampling(or blank if none exist).--sgtf_overrideoption toncbi.biosample_to_genbankthat replaces certain PHA4GE-defined values ofnote("Screening for Variants of Concern (VoC)") with SPHERES-defined values ("screened by S dropout").