broadinstitute / viral-pipelines

viral-ngs: complete pipelines
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demux_deplete: make depletion optional, load biosample metadata to tables #551

Closed dpark01 closed 2 months ago

dpark01 commented 2 months ago

This PR:

The terra-specific bits have been tested live in a dev workspace.

dpark01 commented 2 months ago

Ok this works and also as a side effect it restores the multi-library-merging functionality. It does have odd error modes if input tsv files are malformed--to do for a later date is to perhaps put some tsv validation / fail fast code up front.