broadinstitute / warp

WDL Analysis Research Pipelines
https://broadinstitute.github.io/warp
BSD 3-Clause "New" or "Revised" License
202 stars 96 forks source link

added 1MM_multi option to barcode correction and updated changelogs #1248

Closed ekiernan closed 5 months ago

ekiernan commented 7 months ago

Description

This PR changes the Optimus STARsolo alignment parameters for cell barcode correction to 1MM_multi. This will impact scientific outputs.

Checklist

If you can answer "yes" to the following items, please add a checkmark next to the appropriate checklist item(s) and notify our WARP documentation team by tagging either @ekiernan or @kayleemathews in a comment on this PR.

github-actions[bot] commented 7 months ago

Remember to squash merge!

github-actions[bot] commented 7 months ago

Remember to squash merge!

ekiernan commented 7 months ago

Scientific tests launched here: https://gotc-jenkins.dsp-techops.broadinstitute.org/job/warp-workflow-tests/71662/parameters/

ekiernan commented 7 months ago

Optimus scientific tests here: https://gotc-jenkins.dsp-techops.broadinstitute.org/job/warp-workflow-tests/72041/

ekiernan commented 7 months ago

Running Optimus scientific here: https://gotc-jenkins.dsp-techops.broadinstitute.org/job/warp-workflow-tests/72388/