PD-2675-Adding-cellFilter-EmptyDrops_CR - Githubissues

broadinstitute / warp

WDL Analysis Research Pipelines

https://broadinstitute.github.io/warp

BSD 3-Clause "New" or "Revised" License

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PD-2675-Adding-cellFilter-EmptyDrops_CR #1298

Closed ekiernan closed 1 month ago

ekiernan commented 2 months ago

Description

Testing new filtering criteria with STARolo

Checklist

If you can answer "yes" to the following items, please add a checkmark next to the appropriate checklist item(s) and notify our WARP documentation team by tagging either @ekiernan or @kayleemathews in a comment on this PR.

[ ] Did you add inputs, outputs, or tasks to a workflow?
[ ] Did you modify, delete or move: file paths, file names, input names, output names, or task names?
[ ] If you made a changelog update, did you update the pipeline version number?

github-actions[bot] commented 2 months ago

Remember to squash merge!

github-actions[bot] commented 2 months ago

🔍Changelog Validation Results:

Comparing changelogs for pipelines that differ from the versions on 'origin/develop':
MultiSampleSmartSeq2SingleNucleus.changelog.md has not been changed and needs to be updated
Multiome.changelog.md has not been changed and needs to be updated
SlideSeq.changelog.md has not been changed and needs to be updated
PairedTag.changelog.md has not been changed and needs to be updated
Optimus.changelog.md has not been changed and needs to be updated
Some changelog files need updating. See output for details.
validation_failed

github-actions[bot] commented 2 months ago

🔍Version Validation Results:

Comparing versions and changelogs for pipelines that differ from the versions on 'origin/staging':
MultiSampleSmartSeq2SingleNucleus.wdl has not been changed and needs updating
Multiome.wdl has not been changed and needs updating
SlideSeq.wdl has not been changed and needs updating
PairedTag.wdl has not been changed and needs updating
Optimus.wdl has not been changed and needs updating
Some WDLs or changelog files need updating. See output for details.
validation_failed

github-actions[bot] commented 2 months ago

Remember to squash merge!

github-actions[bot] commented 2 months ago

🔍Changelog Validation Results:

Comparing changelogs for pipelines that differ from the versions on 'origin/develop':
MultiSampleSmartSeq2SingleNucleus.changelog.md has not been changed and needs to be updated
Multiome.changelog.md has not been changed and needs to be updated
SlideSeq.changelog.md has not been changed and needs to be updated
PairedTag.changelog.md has not been changed and needs to be updated
Optimus.changelog.md has not been changed and needs to be updated
Some changelog files need updating. See output for details.
validation_failed

github-actions[bot] commented 2 months ago

🔍Version Validation Results:

Comparing versions and changelogs for pipelines that differ from the versions on 'origin/staging':
MultiSampleSmartSeq2SingleNucleus.wdl has not been changed and needs updating
Multiome.wdl has not been changed and needs updating
SlideSeq.wdl has not been changed and needs updating
PairedTag.wdl has not been changed and needs updating
Optimus.wdl has not been changed and needs updating
Some WDLs or changelog files need updating. See output for details.
validation_failed

github-actions[bot] commented 1 month ago

Remember to squash merge!

github-actions[bot] commented 1 month ago

🔍Changelog Validation Results:

Comparing changelogs for pipelines that differ from the versions on 'origin/develop':
Optimus.changelog.md has not been changed and needs to be updated
MultiSampleSmartSeq2SingleNucleus.changelog.md has not been changed and needs to be updated
SlideSeq.changelog.md has not been changed and needs to be updated
PairedTag.changelog.md has not been changed and needs to be updated
Multiome.changelog.md has not been changed and needs to be updated
Some changelog files need updating. See output for details.
validation_failed

github-actions[bot] commented 1 month ago

🔍Version Validation Results:

Comparing versions and changelogs for pipelines that differ from the versions on 'origin/staging':
Optimus.wdl has not been changed and needs updating
MultiSampleSmartSeq2SingleNucleus.wdl has not been changed and needs updating
SlideSeq.wdl has not been changed and needs updating
PairedTag.wdl has not been changed and needs updating
Multiome.wdl has not been changed and needs updating
Some WDLs or changelog files need updating. See output for details.
validation_failed

github-actions[bot] commented 1 month ago

Remember to squash merge!

github-actions[bot] commented 1 month ago

🔍Changelog Validation Results:

Comparing changelogs for pipelines that differ from the versions on 'origin/develop':
Optimus.changelog.md has not been changed and needs to be updated
MultiSampleSmartSeq2SingleNucleus.changelog.md has not been changed and needs to be updated
SlideSeq.changelog.md has not been changed and needs to be updated
PairedTag.changelog.md has not been changed and needs to be updated
Multiome.changelog.md has not been changed and needs to be updated
Some changelog files need updating. See output for details.
validation_failed

github-actions[bot] commented 1 month ago

🔍Version Validation Results:

Comparing versions and changelogs for pipelines that differ from the versions on 'origin/staging':
Optimus.wdl has not been changed and needs updating
MultiSampleSmartSeq2SingleNucleus.wdl has not been changed and needs updating
SlideSeq.wdl has not been changed and needs updating
PairedTag.wdl has not been changed and needs updating
Multiome.wdl has not been changed and needs updating
Some WDLs or changelog files need updating. See output for details.
validation_failed

github-actions[bot] commented 1 month ago

Remember to squash merge!

github-actions[bot] commented 1 month ago

🔍Changelog Validation Results:

Comparing changelogs for pipelines that differ from the versions on 'origin/develop':
Optimus.changelog.md has not been changed and needs to be updated
MultiSampleSmartSeq2SingleNucleus.changelog.md has not been changed and needs to be updated
SlideSeq.changelog.md has not been changed and needs to be updated
PairedTag.changelog.md has not been changed and needs to be updated
Multiome.changelog.md has not been changed and needs to be updated
Some changelog files need updating. See output for details.
validation_failed

github-actions[bot] commented 1 month ago

🔍Version Validation Results:

Comparing versions and changelogs for pipelines that differ from the versions on 'origin/staging':
Optimus.wdl has not been changed and needs updating
MultiSampleSmartSeq2SingleNucleus.wdl has not been changed and needs updating
SlideSeq.wdl has not been changed and needs updating
PairedTag.wdl has not been changed and needs updating
Multiome.wdl has not been changed and needs updating
Some WDLs or changelog files need updating. See output for details.
validation_failed

github-actions[bot] commented 1 month ago

Remember to squash merge!

github-actions[bot] commented 1 month ago

🔍Changelog Validation Results:

Comparing changelogs for pipelines that differ from the versions on 'origin/develop':
Optimus.changelog.md has not been changed and needs to be updated
MultiSampleSmartSeq2SingleNucleus.changelog.md has not been changed and needs to be updated
SlideSeq.changelog.md has not been changed and needs to be updated
PairedTag.changelog.md has not been changed and needs to be updated
Multiome.changelog.md has not been changed and needs to be updated
Some changelog files need updating. See output for details.
validation_failed

github-actions[bot] commented 1 month ago

🔍Version Validation Results:

Comparing versions and changelogs for pipelines that differ from the versions on 'origin/staging':
Optimus.wdl has not been changed and needs updating
MultiSampleSmartSeq2SingleNucleus.wdl has not been changed and needs updating
SlideSeq.wdl has not been changed and needs updating
PairedTag.wdl has not been changed and needs updating
Multiome.wdl has not been changed and needs updating
Some WDLs or changelog files need updating. See output for details.
validation_failed

github-actions[bot] commented 1 month ago

Remember to squash merge!

github-actions[bot] commented 1 month ago

🔍Version Validation Results:

Comparing versions and changelogs for pipelines that differ from the versions on 'origin/staging':
Optimus.wdl has not been changed and needs updating
MultiSampleSmartSeq2SingleNucleus.wdl has not been changed and needs updating
SlideSeq.wdl has not been changed and needs updating
PairedTag.wdl has not been changed and needs updating
Multiome.wdl has not been changed and needs updating
Some WDLs or changelog files need updating. See output for details.
validation_failed

github-actions[bot] commented 1 month ago

🔍Changelog Validation Results:

Comparing changelogs for pipelines that differ from the versions on 'origin/develop':
Optimus.changelog.md has not been changed and needs to be updated
MultiSampleSmartSeq2SingleNucleus.changelog.md has not been changed and needs to be updated
SlideSeq.changelog.md has not been changed and needs to be updated
PairedTag.changelog.md has not been changed and needs to be updated
Multiome.changelog.md has not been changed and needs to be updated
Some changelog files need updating. See output for details.
validation_failed