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broadinstitute / wdl-runner

Easily run WDL workflows on GCP
BSD 3-Clause "New" or "Revised" License
13 stars 11 forks source link

code in "(1a) Create the Docker image" does not work #17

Open freeseek opened 4 years ago

freeseek commented 4 years ago

In the Tutorial Steps there is the following code:

git clone https://github.com/broadinstitute/wdl.git
cd runners/cromwell_on_google/wdl_runner/
docker build -t ${USER}/wdl_runner .

First of all it should be:

cd wdl/runners/cromwell_on_google/wdl_runner/

Second, the image does not build:

$ docker build -t xxx/wdl_runner .
Sending build context to Docker daemon  40.45kB
Step 1/18 : FROM java:openjdk-8-jre
 ---> e44d62cf8862
Step 2/18 : RUN apt-get update &&     apt-get install python --yes &&     apt-get clean &&     rm -rf /var/lib/apt/lists/*
 ---> Running in 39ea176eccf2
Get:1 http://security.debian.org jessie/updates InRelease [44.9 kB]
Ign http://deb.debian.org jessie InRelease
Get:2 http://deb.debian.org jessie-updates InRelease [16.3 kB]
Ign http://deb.debian.org jessie-backports InRelease
Get:3 http://deb.debian.org jessie Release.gpg [1652 B]
Ign http://deb.debian.org jessie-backports Release.gpg
Get:4 http://deb.debian.org jessie Release [77.3 kB]
Ign http://deb.debian.org jessie-backports Release
Err http://deb.debian.org jessie-backports/main amd64 Packages

Err http://deb.debian.org jessie-backports/main amd64 Packages

Err http://deb.debian.org jessie-backports/main amd64 Packages

Err http://deb.debian.org jessie-backports/main amd64 Packages

Err http://deb.debian.org jessie-backports/main amd64 Packages
  404  Not Found [IP: 199.232.110.133 80]
Get:5 http://security.debian.org jessie/updates/main amd64 Packages [992 kB]
Get:6 http://deb.debian.org jessie-updates/main amd64 Packages [20 B]
Get:7 http://deb.debian.org jessie/main amd64 Packages [9098 kB]
Fetched 10.2 MB in 10s (947 kB/s)
W: There is no public key available for the following key IDs:
AA8E81B4331F7F50
W: Failed to fetch http://deb.debian.org/debian/dists/jessie-backports/main/binary-amd64/Packages  404  Not Found [IP: 199.232.110.133 80]

E: Some index files failed to download. They have been ignored, or old ones used instead.
The command '/bin/sh -c apt-get update &&     apt-get install python --yes &&     apt-get clean &&     rm -rf /var/lib/apt/lists/*' returned a non-zero code: 100