unitizers update problems

[hubabe]

Again problems updating unitizer version 1.4.12 RStudio sessionInfo() R version 4.0.3 (2020-10-10) Platform: x86_64-pc-linux-gnu (64-bit) Running under: Ubuntu 20.04.1 LTS

Matrix products: default BLAS: /usr/lib/x86_64-linux-gnu/atlas/libblas.so.3.10.3 LAPACK: /usr/lib/x86_64-linux-gnu/atlas/liblapack.so.3.10.3

locale: [1] LC_CTYPE=es_CO.UTF-8 LC_NUMERIC=C LC_TIME=es_CO.UTF-8
[4] LC_COLLATE=es_CO.UTF-8 LC_MONETARY=es_CO.UTF-8 LC_MESSAGES=es_CO.UTF-8
[7] LC_PAPER=es_CO.UTF-8 LC_NAME=C LC_ADDRESS=C
[10] LC_TELEPHONE=C LC_MEASUREMENT=es_CO.UTF-8 LC_IDENTIFICATION=C

attached base packages: [1] stats graphics grDevices utils datasets methods base

loaded via a namespace (and not attached): [1] compiler_4.0.3 tools_4.0.3 yaml_2.2.1

install.packages("unitizer") Installing package into ‘/home/hugo/R/x86_64-pc-linux-gnu-library/4.0’ (as ‘lib’ is unspecified) probando la URL 'https://cloud.r-project.org/src/contrib/unitizer_1.4.12.tar.gz' Content type 'application/x-gzip' length 693207 bytes (676 KB)

downloaded 676 KB

• installing source package ‘unitizer’ ... package ‘unitizer’ successfully unpacked and MD5 sums checked using staged installation R demo inst byte-compile and prepare package for lazy loading Error in completeSubclasses(classDef2, class1, obj, where) : tentativa de obtener un slot "subclasses" de un objeto de una clase básica ("NULL") sin slots Error: package or namespace load failed for ‘dbplyr’: .onLoad failed in loadNamespace() for 'dbplyr', details: call: setClass(cl, contains = c(prevClass, "VIRTUAL"), where = where) error: error in contained classes ("character") for class “ident”; class definition removed from ‘dbplyr’ Error in .requirePackage(package) : unable to find required package ‘dbplyr’ Calls: ... .recacheSubclasses -> getClassDef -> .requirePackage Ejecución interrumpida ERROR: lazy loading failed for package ‘unitizer’
• removing ‘/home/hugo/R/x86_64-pc-linux-gnu-library/4.0/unitizer’
• restoring previous ‘/home/hugo/R/x86_64-pc-linux-gnu-library/4.0/unitizer’ Warning in install.packages : installation of package ‘unitizer’ had non-zero exit status

The downloaded source packages are in ‘/tmp/Rtmp57DKRp/downloaded_packages’

Updating unitizer from command line install.packages("unitizer", dependencies = TRUE) Installing package into ‘/home/hugo/R/x86_64-pc-linux-gnu-library/4.0’ (as ‘lib’ is unspecified) probando la URL 'https://cloud.r-project.org/src/contrib/unitizer_1.4.12.tar.gz' Content type 'application/x-gzip' length 693207 bytes (676 KB)

downloaded 676 KB

• installing source package ‘unitizer’ ... package ‘unitizer’ successfully unpacked and MD5 sums checked using staged installation R demo inst byte-compile and prepare package for lazy loading Error in completeSubclasses(classDef2, class1, obj, where) : tentativa de obtener un slot "subclasses" de un objeto de una clase básica ("NULL") sin slots Error: package or namespace load failed for ‘dbplyr’: .onLoad failed in loadNamespace() for 'dbplyr', details: call: setClass(cl, contains = c(prevClass, "VIRTUAL"), where = where) error: error in contained classes ("character") for class “ident”; class definition removed from ‘dbplyr’ Error in .requirePackage(package) : unable to find required package ‘dbplyr’ Calls: ... .recacheSubclasses -> getClassDef -> .requirePackage Ejecución interrumpida ERROR: lazy loading failed for package ‘unitizer’
• removing ‘/home/hugo/R/x86_64-pc-linux-gnu-library/4.0/unitizer’
• restoring previous ‘/home/hugo/R/x86_64-pc-linux-gnu-library/4.0/unitizer’

The downloaded source packages are in ‘/tmp/RtmpgGCZkB/downloaded_packages’ Warning message: In install.packages("unitizer", dependencies = TRUE) : installation of package ‘unitizer’ had non-zero exit status

[brodieG]

I can't reproduce at the moment, but this code leads me to think maybe you don't have an updated version of dplyr installed:

function (...) 
{
    register_s3_method("dplyr", "union", "tbl_lazy")
    register_s3_method("dplyr", "intersect", "tbl_lazy")
    register_s3_method("dplyr", "setdiff", "tbl_lazy")
    register_s3_method("dplyr", "setdiff", "tbl_Oracle")
    register_s3_method("dplyr", "setdiff", "OraConnection")
    register_s3_method("dplyr", "filter", "tbl_lazy")
    if (utils::packageVersion("dplyr") >= "0.8.99") {
        register_s3_method("dplyr", "group_by_drop_default", 
            "tbl_lazy")
        methods::setOldClass(c("ident_q", "ident", "character"), 
            ident_q())
        methods::setOldClass(c("ident", "character"), ident())
        methods::setOldClass(c("sql", "character"), sql())
    }
}
<bytecode: 0x7fa4ca9af008>
<environment: namespace:dbplyr>

Will you run packageVersion('dplyr'), and if it's not > 0.8.99 update that package and try re-installing?

[brodieG]

I saw you forked the package, just fyi I just merged the latest CRAN version to master.

[brodieG]

I'm closing this as I haven't heard anything in a while. Feel free to re-open if you're able to isolate this further than we've gotten previously.