brouwern / compbio2021

Assignments for Computational Biology Fall 2021 at the University of Pittsburgh
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Key Comment #38

Open zaf18 opened 2 years ago

zaf18 commented 2 years ago

https://github.com/brouwern/compbio2021/blob/4fc22d26cd66119a177fd9572bd409ffa989216d/KEY-MSA-walkthrough-shroom.Rmd#L298

Are we required to understand this code chunk? If so, can you explain the syntax and what this is doing?

brouwern commented 2 years ago

no, this was included just as an example of pasting a function directly into a script in order to use it even if you can't get the package working

this function uses a class of other functions called regular expressions that we will probably cover in the next unit, but I don't always get to every year

On Mon, Oct 4, 2021 at 11:40 AM zaf18 @.***> wrote:

https://github.com/brouwern/compbio2021/blob/4fc22d26cd66119a177fd9572bd409ffa989216d/KEY-MSA-walkthrough-shroom.Rmd#L298

Are we required to understand this code chunk? If so, can you explain the syntax and what this is doing?

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Nathan L. Brouwer, PhD

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Lecturer

Department of Biological Sciences https://www.biology.pitt.edu/

University of Pittsburgh

Biostatistics course: brouwern.github.io/BIOSC_1120/index.html

Research Associate

National Aviary, Dept. of Conservation & Field Research https://www.aviary.org/conservation

R code: github.com/brouwern

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