brouwern / compbio2021

Assignments for Computational Biology Fall 2021 at the University of Pittsburgh
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Workflow Comment #46

Open iansnyder333 opened 2 years ago

iansnyder333 commented 2 years ago

https://github.com/brouwern/compbio2021/blob/4fc22d26cd66119a177fd9572bd409ffa989216d/KEY-MSA-walkthrough-shroom.Rmd#L166 Ian Snyder: GGMSA was previously a CRAN package but was removed from their platform, what are some reasons these types of occurances happen?

brouwern commented 2 years ago

Usually if they didn’t keep up the maintenance. Cran is pretty picky. Really now that everyone uses GitHub there’s not a difference between in GitHub and on cran. Cran also has special rules about the size of the package which can limit the size of example files so some people will keep it on GitHub.

On Mon, Oct 4, 2021 at 6:01 PM iansnyder333 @.***> wrote:

https://github.com/brouwern/compbio2021/blob/4fc22d26cd66119a177fd9572bd409ffa989216d/KEY-MSA-walkthrough-shroom.Rmd#L166 Ian Snyder: GGMSA was previously a CRAN package but was removed from their platform, what are some reasons these types of occurances happen?

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Nathan L. Brouwer, PhD

@.***

Lecturer

Department of Biological Sciences https://www.biology.pitt.edu/

University of Pittsburgh

Biostatistics course: brouwern.github.io/BIOSC_1120/index.html

Research Associate

National Aviary, Dept. of Conservation & Field Research https://www.aviary.org/conservation

R code: github.com/brouwern

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